WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  In the MASCOT search the proteins were searched against a mass tolerance of +/- 50and 100 ppm with one missed cleavage per peptide were allowed in all searches. Proteins with consistent hit against different mass tolerance, different databases and significant score >50 only were accepted. Description  Proteins that showed significantly decreased expression after 24 hours of infection by Pseudomonas aeruginosa PAO1 strain, accroding to 2D-DIGE and mass spectrometry.
Primary Identifier  WBPaper00049595:P.aeruginosa_24h_downregulated Regulated By Treatment  Bacteria infection: Pseudomonas aeruginosa PAO1

0 Anatomy Terms

8 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00001685 gpd-3 K10B3.7 Caenorhabditis elegans
WBGene00002258 lbp-6 W02D3.5 Caenorhabditis elegans
WBGene00009119 ndk-1 F25H2.5 Caenorhabditis elegans
WBGene00014095 gdh-1 ZK829.4 Caenorhabditis elegans
WBGene00013247 Y57A10A.2 Y57A10A.2 Caenorhabditis elegans
WBGene00017490 pud-2.1 F15E11.1 Caenorhabditis elegans
WBGene00219240 CBG29119 CBG29119 Caenorhabditis briggsae

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

0 Regulated By Gene

0 Regulated By Molecule