WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify differential gene expression, analysis was performed using Cuffdiff program of Cufflinks 2.2.1 with false discovery ratecorrected p values (q values) of < 0.05 and fold change > 2 or < 0.5. Description  Genes that showed significantly increased expression after animals were exposed 50mM MnCl2 for 30min at L1 larva stage and harvested at L4 larva stage.
Primary Identifier  WBPaper00048611:MnCl2_upregulated

0 Anatomy Terms

206 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000599 col-10 B0222.8 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000739 col-166 T07H6.3 Caenorhabditis elegans
WBGene00000742 col-169 T10E10.5 Caenorhabditis elegans
WBGene00000749 col-176 ZC373.7 Caenorhabditis elegans
WBGene00001063 dpy-1 M01E10.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001070 dpy-8 C31H2.2 Caenorhabditis elegans
WBGene00001071 dpy-9 T21D12.2 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001079 dpy-20 T22B3.1 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001432 fkb-7 B0511.1 Caenorhabditis elegans
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00002393 lpr-1 Y65B4BR.2 Caenorhabditis elegans
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans
WBGene00003100 mab-3 Y53C12B.5 Caenorhabditis elegans
WBGene00003522 nas-3 K06A4.1 Caenorhabditis elegans
WBGene00003534 nas-15 T04G9.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
manganese chloride WBMol:00004860