WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  BRB Array Tools were used to identify genes with statistically significant variation in expression. The probability threshold was set at a maximum of 0.05 (p-value <= 0.05) for genes to be considered statistically differentially expressed in wild-type and mutant populations. Genes with a signal variation of 1.5-fold or greater were selected for subsequent experiments. To reduce false discoveries, a class comparison test was conducted using a multivariate per mutation test with a confidence level of 97% (L1 analysis) and 90% (adults). Description  Genes that showed significantly increased expression in daf-19(m86);daf-12(sa204) comparing to in daf-12(sa204), at L1 larva stage.
Primary Identifier  WBPaper00053550:daf-19(m86)_upregulated_L1

0 Anatomy Terms

134 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000169 aqp-1 F32A5.5 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000282 cah-4 R01E6.3 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000680 col-106 Y77E11A.15 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00000754 col-181 W03G11.1 Caenorhabditis elegans
WBGene00000786 cpr-6 C25B8.3 Caenorhabditis elegans
WBGene00000901 daf-5 W01G7.1 Caenorhabditis elegans
WBGene00001127 dyf-11 C02H7.1 Caenorhabditis elegans
WBGene00001243 elo-5 F41H10.7 Caenorhabditis elegans
WBGene00001477 fmo-2 K08C7.5 Caenorhabditis elegans
WBGene00001546 gcy-21 F22E5.3 Caenorhabditis elegans
WBGene00001768 gst-20 Y48E1B.10 Caenorhabditis elegans
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans
WBGene00003093 lys-4 F58B3.1 Caenorhabditis elegans
WBGene00003474 mtl-2 T08G5.10 Caenorhabditis elegans
WBGene00003740 nlp-2 T24D8.5 Caenorhabditis elegans
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
WBGene00003957 pcp-2 F23B2.12 Caenorhabditis elegans
WBGene00004078 pos-1 F52E1.1 Caenorhabditis elegans
WBGene00004092 ppt-1 F44C4.5 Caenorhabditis elegans
WBGene00004326 rde-4 T20G5.11 Caenorhabditis elegans
WBGene00004878 smf-3 Y69A2AR.4 Caenorhabditis elegans
WBGene00005105 srd-27 T26E4.12 Caenorhabditis elegans
WBGene00006195 str-148 M01D1.1 Caenorhabditis elegans
WBGene00006472 tag-123 F08F1.7 Caenorhabditis elegans
WBGene00006526 tax-4 ZC84.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans

0 Regulated By Molecule