WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The quasi-likelihood F-test from the edgeR package was used to test these counts for statistically significant differential gene expression between water- and mianserin-treated samples, while controlling for expression differences between the 3 biological replicates. We performed multiple testing correction by using the Benjamini-Hochberg procedure to compute a false discovery rate (FDR) value for each gene, and we considered an FDR less than 10% to be significant. Description  Genes that increased expression in response to 50uM mianserin on adult day 10, which are not a response to aging. This is a list of 138 genes.
Primary Identifier  WBPaper00048926:miaserin_upregulated_adult-day10

0 Anatomy Terms

137 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000482 chd-3 T14G8.1 Caenorhabditis elegans
WBGene00000646 H17B01.2 H17B01.2 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001395 fat-3 W08D2.4 Caenorhabditis elegans
WBGene00001481 fog-1 Y54E10A.4 Caenorhabditis elegans
WBGene00001578 ges-1 R12A1.4 Caenorhabditis elegans
WBGene00001754 gst-6 F11G11.3 Caenorhabditis elegans
WBGene00001773 gst-25 F37F2.3 Caenorhabditis elegans
WBGene00001828 hch-1 F40E10.1 Caenorhabditis elegans
WBGene00003539 nas-20 T11F9.3 Caenorhabditis elegans
WBGene00003828 nuc-1 C07B5.5 Caenorhabditis elegans
WBGene00003956 pcp-1 ZK112.1 Caenorhabditis elegans
WBGene00004814 skr-8 C52D10.9 Caenorhabditis elegans
WBGene00004815 skr-9 C52D10.7 Caenorhabditis elegans
WBGene00004821 skr-15 F54D10.1 Caenorhabditis elegans
WBGene00006890 vem-1 K07E3.8 Caenorhabditis elegans
WBGene00007245 cror-1 C01G12.5 Caenorhabditis elegans
WBGene00007362 cyp-35C1 C06B3.3 Caenorhabditis elegans
WBGene00007760 C27B7.2 C27B7.2 Caenorhabditis elegans
WBGene00007848 cytb-5.1 C31E10.7 Caenorhabditis elegans
WBGene00007864 irg-6 C32H11.1 Caenorhabditis elegans
WBGene00007875 dod-24 C32H11.12 Caenorhabditis elegans
WBGene00008492 F01D5.1 F01D5.1 Caenorhabditis elegans
WBGene00008494 F01D5.3 F01D5.3 Caenorhabditis elegans
WBGene00008495 F01D5.5 F01D5.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 10-11 days after L4-adult molt. 13-14 days after first cleavage. 10-days post-L4 adult hermaphrodite Ce WBls:0000674

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
mianserin WBMol:00003509