WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%. Description  Genes differentially expressed in pgrn-1(tm985) and ced-3(n717) but not in ced-1(e1735) as compared to N2E.
Primary Identifier  WBPaper00044246:pgrn-1_ced-3_downregulated

0 Anatomy Terms

168 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001638 gly-13 B0416.6 Caenorhabditis elegans
WBGene00001758 gst-10 Y45G12C.2 Caenorhabditis elegans
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
WBGene00003521 nas-2 F56A4.1 Caenorhabditis elegans
WBGene00003616 nhr-17 C02B4.2 Caenorhabditis elegans
WBGene00003617 nhr-18 F44C8.3 Caenorhabditis elegans
WBGene00003633 nhr-43 C29E6.5 Caenorhabditis elegans
WBGene00003649 nhr-59 T27B7.1 Caenorhabditis elegans
WBGene00003686 nhr-96 F44C8.11 Caenorhabditis elegans
WBGene00003716 nhr-126 F44C8.10 Caenorhabditis elegans
WBGene00003723 nhr-133 F44C8.8 Caenorhabditis elegans
WBGene00003957 pcp-2 F23B2.12 Caenorhabditis elegans
WBGene00004825 skr-19 R12H7.3 Caenorhabditis elegans
WBGene00004986 spp-1 T07C4.4 Caenorhabditis elegans
WBGene00004987 spp-2 T08A9.12 Caenorhabditis elegans
WBGene00005138 srd-61 C01B4.5 Caenorhabditis elegans
WBGene00006136 str-76 C01B4.10 Caenorhabditis elegans
WBGene00006200 str-154 Y45G12C.12 Caenorhabditis elegans
WBGene00006279 str-253 F41B5.8 Caenorhabditis elegans
WBGene00006281 str-255 C45H4.15 Caenorhabditis elegans
WBGene00006283 str-257 C01B4.1 Caenorhabditis elegans
WBGene00006284 str-258 C01B4.3 Caenorhabditis elegans
WBGene00007440 C08E8.4 C08E8.4 Caenorhabditis elegans
WBGene00007691 cest-8 C23H4.2 Caenorhabditis elegans
WBGene00007692 cest-9.1 C23H4.3 Caenorhabditis elegans
WBGene00008486 ugt-44 F01D4.2 Caenorhabditis elegans
WBGene00009773 lipl-2 F46B6.8 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011936 pgrn-1 T22H2.6 Caenorhabditis elegans

0 Regulated By Molecule