WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2(v1.32.0), FDR < 0.05. Description  Transcripts that showed significantly decreased expression in met-1(bn200) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
Primary Identifier  WBPaper00064315:met-1(bn200)_downregulated_PGCs
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
member of a set of two cells that generate exclusively sperm and ovum. germline precursor cell PGC WBbt:0006849

35 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000857 cwn-1 K10B4.6 Caenorhabditis elegans
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans
WBGene00003495 mup-2 T22E5.5 Caenorhabditis elegans
WBGene00003934 pat-10 F54C1.7 Caenorhabditis elegans
WBGene00004086 pph-4.2 Y49E10.3 Caenorhabditis elegans
WBGene00004314 rbc-2 Y54F10AM.10 Caenorhabditis elegans
WBGene00004404 rom-5 Y54E10A.14 Caenorhabditis elegans
WBGene00006714 ubc-19 Y69H2.6 Caenorhabditis elegans
WBGene00006789 unc-54 F11C3.3 Caenorhabditis elegans
WBGene00007516 gpx-5 C11E4.1 Caenorhabditis elegans
WBGene00007589 erg-28 C14C10.6 Caenorhabditis elegans
WBGene00007614 gnrr-2 C15H11.2 Caenorhabditis elegans
WBGene00009365 gsox-1 F33H1.4 Caenorhabditis elegans
WBGene00009865 F49B2.6 F49B2.6 Caenorhabditis elegans
WBGene00011869 dod-6 T20G5.7 Caenorhabditis elegans
WBGene00013690 hprt-1 Y105E8B.5 Caenorhabditis elegans
WBGene00014198 ZK1053.3 ZK1053.3 Caenorhabditis elegans
WBGene00016103 dpyd-1 C25F6.3 Caenorhabditis elegans
WBGene00016650 ubr-4 C44E4.1 Caenorhabditis elegans
WBGene00018318 F41H10.5 F41H10.5 Caenorhabditis elegans
WBGene00018473 cima-1 F45E4.11 Caenorhabditis elegans
WBGene00019168 H06I04.3 H06I04.3 Caenorhabditis elegans
WBGene00019946 chat-1 R08C7.2 Caenorhabditis elegans
WBGene00020808 clik-1 T25F10.6 Caenorhabditis elegans
WBGene00020825 tmem-231 T26A8.2 Caenorhabditis elegans
WBGene00020895 plpp-1.2 T28D9.3 Caenorhabditis elegans
WBGene00021960 tmem-258 Y57E12AM.1 Caenorhabditis elegans
WBGene00022123 Y71F9AR.2 Y71F9AR.2 Caenorhabditis elegans
WBGene00022173 set-27 Y71H2AM.8 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  The stage after an male animal is fully-developed and reaches maturity. adult male Ce WBls:0000056

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016603 met-1 C43E11.3 Caenorhabditis elegans

0 Regulated By Molecule