WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2v 1.18.1, fold change > 1.5, adjusted p-value < 0.01. Description  Transcripts that showed significantly increased expression in rrf-3(pk1426) comparing to in N2 at L1 larva stage.
Primary Identifier  WBPaper00056169:rrf-3(pk1426)_upregulated_L1
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0 Anatomy Terms

251 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000624 col-47 Y18H1A.12 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000714 col-141 T15B7.5 Caenorhabditis elegans
WBGene00000722 col-149 B0024.1 Caenorhabditis elegans
WBGene00000731 col-158 D2023.7 Caenorhabditis elegans
WBGene00000882 cyn-6 F42G9.2 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001070 dpy-8 C31H2.2 Caenorhabditis elegans
WBGene00001071 dpy-9 T21D12.2 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001079 dpy-20 T22B3.1 Caenorhabditis elegans
WBGene00001694 grd-5 F41E6.2 Caenorhabditis elegans
WBGene00001842 her-1 ZK287.8 Caenorhabditis elegans
WBGene00001950 hlh-3 T24B8.6 Caenorhabditis elegans
WBGene00002016 hsp-16.2 Y46H3A.3 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002246 lag-2 Y73C8B.4 Caenorhabditis elegans
WBGene00002282 let-4 C44H4.2 Caenorhabditis elegans
WBGene00002393 lpr-1 Y65B4BR.2 Caenorhabditis elegans
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004510 rrf-3 F10B5.7 Caenorhabditis elegans

0 Regulated By Molecule