WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression was assessed using a nempirical Bayes moderated t-test within limmas linear model framework including the precision weights estimated by voom.Resulting p-values were corrected for multiple testing using the Benjamini-Hochberg false discovery rate. Curator applied threshold: fold change > 2, adjusted p-value < 0.01. Description  Transcripts that showed significantly increased expression after animals grew in 500 uM glycine from hatch till 1-day post L4 adult, comparing to untreated animals.
Primary Identifier  WBPaper00056330:glycine_upregulated

0 Anatomy Terms

220 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000388 cdc-25.3 ZK637.11 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00001435 fkh-3 C29F7.4 Caenorhabditis elegans
WBGene00001436 fkh-4 C29F7.5 Caenorhabditis elegans
WBGene00001569 meg-3 F52D2.4 Caenorhabditis elegans
WBGene00001912 his-38 K03A1.6 Caenorhabditis elegans
WBGene00001981 hnd-1 C44C10.8 Caenorhabditis elegans
WBGene00002124 inx-2 F08G12.10 Caenorhabditis elegans
WBGene00003219 mes-1 F54F7.5 Caenorhabditis elegans
WBGene00003601 nhr-2 C32F10.6 Caenorhabditis elegans
WBGene00003784 nos-2 ZK1127.1 Caenorhabditis elegans
WBGene00003865 oma-2 ZC513.6 Caenorhabditis elegans
WBGene00004354 rgs-11 F45B8.1 Caenorhabditis elegans
WBGene00004750 sea-1 F19B10.9 Caenorhabditis elegans
WBGene00004813 skr-7 Y47D7A.1 Caenorhabditis elegans
WBGene00004816 skr-10 Y105C5B.13 Caenorhabditis elegans
WBGene00004820 skr-14 Y47D7A.8 Caenorhabditis elegans
WBGene00004821 skr-15 F54D10.1 Caenorhabditis elegans
WBGene00005040 sra-14 F35C5.2 Caenorhabditis elegans
WBGene00006541 tbh-1 H13N06.6 Caenorhabditis elegans
WBGene00006546 tbx-9 T07C4.6 Caenorhabditis elegans
WBGene00006555 tbx-36 ZK829.5 Caenorhabditis elegans
WBGene00006636 tsp-10 T14B4.4 Caenorhabditis elegans
WBGene00006925 vit-1 K09F5.2 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
glycine WBMol:00006283