WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 17 expressed in: sh2 (gonadal sheath distal).
Primary Identifier  WBPaper00065623:17
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Cylindrical hypodermal syncytium in head hyp5 lineage name: ABarpappap WBbt:0004685
five pairs of thin gonadal sheath cells form a single layer covering the germ line component of each arm, each pair occupying a stereotyped position along the gonad proximal-distal axis. gonadal sheath cell   WBbt:0005828
Cylindrical hypodermal syncytium in head hyp6 lineage name: ABarpaapaa WBbt:0004679

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00008132 gale-1 C47B2.6 Caenorhabditis elegans
WBGene00016534 C39D10.7 C39D10.7 Caenorhabditis elegans
WBGene00018271 ctsa-1.1 F41C3.5 Caenorhabditis elegans
WBGene00020149 T01D1.4 T01D1.4 Caenorhabditis elegans
WBGene00021078 unc-132 W08A12.1 Caenorhabditis elegans
WBGene00016638 perm-4 C44B12.5 Caenorhabditis elegans
WBGene00016636 perm-2 C44B12.1 Caenorhabditis elegans
WBGene00007196 B0513.4 B0513.4 Caenorhabditis elegans
WBGene00020218 T04G9.7 T04G9.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule