WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq Description  Genes enriched in RID neurons. Authors compared genes enriched in FACS sorted GFP+ cells (RID, ALA, AIY, CAN and a sheath cell) vs. whole animal in WT hpIs202[Pceh-10GFP] (WT enriched sets), and genes enriched in FACS sorted GFP+ cells (ALA, AIY, CAN and a sheath cell) vs. whole animal in unc-39(hp701) hpIs202[Pceh-10GFP] (unc-39 enriched sets) at L2 larva stage. This set of genes are WT enriched but not unc-39 enriched, suggesting they are enriched in RID neurons.
Primary Identifier  WBPaper00050496:RID_enriched

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one ring motoneuron, projects along dorsal cord, innervates dorsal body muscle. RID lineage name: ABalappaapa WBbt:0003938

152 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000978 dhs-15 R05D8.10 Caenorhabditis elegans
WBGene00001400 fax-1 F56E3.4 Caenorhabditis elegans
WBGene00001457 flp-14 Y37D8A.15 Caenorhabditis elegans
WBGene00001477 fmo-2 K08C7.5 Caenorhabditis elegans
WBGene00001480 fmo-5 H24K24.5 Caenorhabditis elegans
WBGene00001672 gpa-10 C55H1.2 Caenorhabditis elegans
WBGene00001986 hot-1 F43D2.4 Caenorhabditis elegans
WBGene00002100 ins-17 F56F3.6 Caenorhabditis elegans
WBGene00002128 inx-6 C36H8.2 Caenorhabditis elegans
WBGene00002178 jnk-1 B0478.1 Caenorhabditis elegans
WBGene00002218 klp-6 R144.1 Caenorhabditis elegans
WBGene00002987 lim-4 ZC64.4 Caenorhabditis elegans
WBGene00003695 nhr-105 C06G3.1 Caenorhabditis elegans
WBGene00004344 rgs-1 C05B5.7 Caenorhabditis elegans
WBGene00005033 sra-7 AH6.11 Caenorhabditis elegans
WBGene00005081 srd-3 K10B4.5 Caenorhabditis elegans
WBGene00005129 srd-51 F15A2.3 Caenorhabditis elegans
WBGene00005346 srh-129 F14F9.7 Caenorhabditis elegans
WBGene00005670 sru-7 C28C12.13 Caenorhabditis elegans
WBGene00005815 srw-68 F18E3.4 Caenorhabditis elegans
WBGene00006062 stn-1 F30A10.8 Caenorhabditis elegans
WBGene00006475 tyra-3 M03F4.3 Caenorhabditis elegans
WBGene00006676 twk-23 F19D8.1 Caenorhabditis elegans
WBGene00006684 twk-32 F53C11.6 Caenorhabditis elegans
WBGene00006982 zig-5 Y48A6A.1 Caenorhabditis elegans
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans
WBGene00008531 F02E9.7 F02E9.7 Caenorhabditis elegans
WBGene00008656 lron-5 F10F2.4 Caenorhabditis elegans
WBGene00008695 F11C3.1 F11C3.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule