WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 19 expressed in: sh3_sh4 (gonadal sheath proximal).
Primary Identifier  WBPaper00065623:19
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Cylindrical hypodermal syncytium in head hyp5 lineage name: ABarpappap WBbt:0004685
five pairs of thin gonadal sheath cells form a single layer covering the germ line component of each arm, each pair occupying a stereotyped position along the gonad proximal-distal axis. gonadal sheath cell   WBbt:0005828
Cylindrical hypodermal syncytium in head hyp6 lineage name: ABarpaapaa WBbt:0004679

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002130 inx-8 ZK792.2 Caenorhabditis elegans
WBGene00006541 tbh-1 H13N06.6 Caenorhabditis elegans
WBGene00009897 skpo-1 F49E12.1 Caenorhabditis elegans
WBGene00011124 sdz-27 R07H5.4 Caenorhabditis elegans
WBGene00016534 C39D10.7 C39D10.7 Caenorhabditis elegans
WBGene00016627 C44B7.5 C44B7.5 Caenorhabditis elegans
WBGene00018271 ctsa-1.1 F41C3.5 Caenorhabditis elegans
WBGene00018605 try-14 F48E3.4 Caenorhabditis elegans
WBGene00016638 perm-4 C44B12.5 Caenorhabditis elegans
WBGene00016636 perm-2 C44B12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule