WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Description  Transcripts in CB4856 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)
Primary Identifier  WBPaper00062684:pathogen_downregulated_CB4856 Regulated By Treatment  Bacteria: S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50 24 hour exposure since L4 larva.

0 Anatomy Terms

20 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00002090 ins-7 ZK1251.2 Caenorhabditis elegans
WBGene00010884 M7.8 M7.8 Caenorhabditis elegans
WBGene00012907 cpt-1 Y46G5A.17 Caenorhabditis elegans
WBGene00013905 ugt-4 ZC455.5 Caenorhabditis elegans
WBGene00013982 ZK512.1 ZK512.1 Caenorhabditis elegans
WBGene00015268 fbxo-11.2 BE0003N10.3 Caenorhabditis elegans
WBGene00017721 F22F7.3 F22F7.3 Caenorhabditis elegans
WBGene00019444 frpr-11 K06C4.8 Caenorhabditis elegans
WBGene00019644 cpt-4 K11D12.4 Caenorhabditis elegans
WBGene00044058 F17B5.6 F17B5.6 Caenorhabditis elegans
WBGene00021135 W10G11.2 W10G11.2 Caenorhabditis elegans
WBGene00021137 W10G11.4 W10G11.4 Caenorhabditis elegans
WBGene00017949 F31D5.6 F31D5.6 Caenorhabditis elegans
WBGene00195034 F40G9.20 F40G9.20 Caenorhabditis elegans
WBGene00017484 F15E6.3 F15E6.3 Caenorhabditis elegans
WBGene00016594 srlf-7 C42D4.1 Caenorhabditis elegans
WBGene00009497 F36H1.12 F36H1.12 Caenorhabditis elegans
WBGene00044514 R09E12.9 R09E12.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule