WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using DESeq2 v1.6.3 in R version 3.2.3. All analyses were performed with genes that had average expression level above 1 RPKM (fragments per kilobase per million, as calculated by Cufflinks). Description  Transcripts that showed significantly increased expression (fold change > 2, adjusted p-value < 0.05) in dpy-27(RNAi) comparing to in control animals (N2 injected with vector RNAi).
Primary Identifier  WBPaper00050193:dpy-27(RNAi)_upregulated_L1

0 Anatomy Terms

84 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000174 aqp-6 C32C4.2 Caenorhabditis elegans
WBGene00000454 ceh-33 C10G8.7 Caenorhabditis elegans
WBGene00000560 cnc-6 Y46E12A.1 Caenorhabditis elegans
WBGene00000621 col-44 F54B11.2 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
WBGene00001752 gst-4 K08F4.7 Caenorhabditis elegans
WBGene00001766 gst-18 F37B1.7 Caenorhabditis elegans
WBGene00002017 hsp-16.11 T27E4.2 Caenorhabditis elegans
WBGene00002103 ins-20 ZK84.7 Caenorhabditis elegans
WBGene00004144 srlf-35 R11G11.7 Caenorhabditis elegans
WBGene00007437 C08E8.1 C08E8.1 Caenorhabditis elegans
WBGene00008575 scl-24 F08E10.7 Caenorhabditis elegans
WBGene00008602 oac-14 F09B9.1 Caenorhabditis elegans
WBGene00008795 F14D7.8 F14D7.8 Caenorhabditis elegans
WBGene00009855 clec-22 F49A5.3 Caenorhabditis elegans
WBGene00010019 F54B8.4 F54B8.4 Caenorhabditis elegans
WBGene00010256 hrg-3 F58E6.7 Caenorhabditis elegans
WBGene00011141 nlp-66 R08B4.5 Caenorhabditis elegans
WBGene00011262 pho-8 R13H4.3 Caenorhabditis elegans
WBGene00012585 lips-15 Y38E10A.7 Caenorhabditis elegans
WBGene00012961 Y47H10A.5 Y47H10A.5 Caenorhabditis elegans
WBGene00013901 ugt-16 ZC443.6 Caenorhabditis elegans
WBGene00015216 valv-1 B0496.7 Caenorhabditis elegans
WBGene00015535 C06E4.6 C06E4.6 Caenorhabditis elegans
WBGene00016013 ugt-66 C23G10.6 Caenorhabditis elegans
WBGene00017265 snpc-1.3 F08F3.9 Caenorhabditis elegans
WBGene00017336 ugt-41 F10D2.11 Caenorhabditis elegans
WBGene00017658 F21C10.9 F21C10.9 Caenorhabditis elegans
WBGene00017764 F25A2.1 F25A2.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001086 dpy-27 R13G10.1 Caenorhabditis elegans

0 Regulated By Molecule