WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Among those genes with an adjusted q-value (based on FDR) of < 0.05, authors used hierarchical clustering based on the HOPACH algorithm, which provides a criterion for choosing the optimal number of clusters for each level of the hierarchy by utilizing the silhouette statistic. Description  Genes with increased expression levels (P < 0.05) under ifg-1 inhibition.
Primary Identifier  WBPaper00039835:ifg-1_upregulated

0 Anatomy Terms

45 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00001137 eat-6 B0365.3 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001390 far-6 W02A2.2 Caenorhabditis elegans
WBGene00001502 ftt-2 F52D10.3 Caenorhabditis elegans
WBGene00001503 fum-1 H14A12.2 Caenorhabditis elegans
WBGene00001685 gpd-3 K10B3.7 Caenorhabditis elegans
WBGene00002025 hsp-60 Y22D7AL.5 Caenorhabditis elegans
WBGene00002254 lbp-2 F40F4.2 Caenorhabditis elegans
WBGene00003162 mdh-2 F20H11.3 Caenorhabditis elegans
WBGene00003370 mlc-2 C36E6.5 Caenorhabditis elegans
WBGene00004014 phb-1 Y37E3.9 Caenorhabditis elegans
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
WBGene00006789 unc-54 F11C3.3 Caenorhabditis elegans
WBGene00006925 vit-1 K09F5.2 Caenorhabditis elegans
WBGene00006926 vit-2 C42D8.2 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans
WBGene00006929 vit-5 C04F6.1 Caenorhabditis elegans
WBGene00006930 vit-6 K07H8.6 Caenorhabditis elegans
WBGene00007385 atp-5 C06H2.1 Caenorhabditis elegans
WBGene00008505 F01G4.6 F01G4.6 Caenorhabditis elegans
WBGene00009454 F36A2.7 F36A2.7 Caenorhabditis elegans
WBGene00010419 atp-1 H28O16.1 Caenorhabditis elegans
WBGene00010440 ttr-51 JC8.8 Caenorhabditis elegans
WBGene00011232 pck-2 R11A5.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002066 ifg-1 M110.4 Caenorhabditis elegans

0 Regulated By Molecule