WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 136 expressed in: AVF.
Primary Identifier  WBPaper00065623:136
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons, processes in ventral cord and ring, few synapses. AVF AVFL/R WBbt:0003851
Neuron class of two phasmid neurons, type B. PHB   WBbt:0007808
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. LUA   WBbt:0008031

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00003741 nlp-3 F48C11.3 Caenorhabditis elegans
WBGene00003752 nlp-14 D1009.4 Caenorhabditis elegans
WBGene00007908 C34B4.3 C34B4.3 Caenorhabditis elegans
WBGene00012776 Y42A5A.1 Y42A5A.1 Caenorhabditis elegans
WBGene00013662 Y105C5B.25 Y105C5B.25 Caenorhabditis elegans
WBGene00016114 flp-27 C25H3.5 Caenorhabditis elegans
WBGene00017850 F27B10.1 F27B10.1 Caenorhabditis elegans
WBGene00019228 H23L24.1 H23L24.1 Caenorhabditis elegans
WBGene00020865 T27E4.7 T27E4.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule