WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. Description  MicroRNAs that showed significantly increased expression in mir-71(n4115) comparing to in N2 at 4-days post L4 adult hermaphrodite.
Primary Identifier  WBPaper00053318:mir-71(n4115)_upregulated_miRNA
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0 Anatomy Terms

86 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002993 lin-4 F59G1.6 Caenorhabditis elegans
WBGene00003039 mir-48 F56A12.3 Caenorhabditis elegans
WBGene00003088 lsy-6 C32C4.6 Caenorhabditis elegans
WBGene00003261 mir-2 M04C9.7 Caenorhabditis elegans
WBGene00003262 mir-34 Y41G9A.7 Caenorhabditis elegans
WBGene00003284 mir-56 F09A5.8 Caenorhabditis elegans
WBGene00003308 mir-80 K01F9.3 Caenorhabditis elegans
WBGene00003312 mir-84 B0395.4 Caenorhabditis elegans
WBGene00003335 mir-241 F56A12.4 Caenorhabditis elegans
WBGene00003278 mir-50 Y71G12B.29 Caenorhabditis elegans
WBGene00003338 mir-244 T04D1.5 Caenorhabditis elegans
WBGene00219261 mir-4926 C27A12.13 Caenorhabditis elegans
WBGene00003260 mir-1 T09B4.11 Caenorhabditis elegans
WBGene00003339 mir-245 F55D12.7 Caenorhabditis elegans
WBGene00003307 mir-79 C12C8.4 Caenorhabditis elegans
WBGene00045329 mir-795 F33E2.9 Caenorhabditis elegans
WBGene00045328 mir-794 T07D10.7 Caenorhabditis elegans
WBGene00003300 mir-72 F53G2.9 Caenorhabditis elegans
WBGene00077709 mir-1822 ZK84.8 Caenorhabditis elegans
WBGene00003288 mir-60 C32D5.13 Caenorhabditis elegans
WBGene00219246 mir-2953 F41G3.23 Caenorhabditis elegans
WBGene00003329 mir-236 C52E12.7 Caenorhabditis elegans
WBGene00003285 mir-57 T09A5.13 Caenorhabditis elegans
WBGene00003313 mir-85 F49E12.11 Caenorhabditis elegans
WBGene00003346 mir-252 W02B12.14 Caenorhabditis elegans
WBGene00014534 mir-355 T27D12.5 Caenorhabditis elegans
WBGene00219222 mir-4806 C44C11.7 Caenorhabditis elegans
WBGene00003305 mir-77 T21B4.13 Caenorhabditis elegans
WBGene00219226 mir-4929 E01G4.9 Caenorhabditis elegans
WBGene00003327 mir-234 C13B4.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage. 4-days post-L4 adult hermaphrodite Ce WBls:0000067

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003299 mir-71 F16A11.4 Caenorhabditis elegans

0 Regulated By Molecule