WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The dysregulated expression of miRNAs in GO-exposed nematodes was analyzed by DESeq (an R package, a powerful tool to estimate the variance and test for differential expression). The data were extracted as up- or down-regulated miRNAs according to a cutoff of 2 fold change, and were presented in the scatter diagram after normalization. Description  miRNAs that showed decreased expression after exposure to graphene oxide (GO)
Primary Identifier  WBPaper00045209:graphene-oxide_downregulated
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0 Anatomy Terms

8 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00219219 mir-5546 Y71F9AL.22 Caenorhabditis elegans
WBGene00003270 mir-42 ZK930.8 Caenorhabditis elegans
WBGene00194828 mir-2214 B0361.12 Caenorhabditis elegans
WBGene00003324 mir-231 R13A5.14 Caenorhabditis elegans
WBGene00077722 mir-58.2 Y73B6A.7 Caenorhabditis elegans
WBGene00194805 mir-2210 ZK593.12 Caenorhabditis elegans
WBGene00045360 mir-800 R04A9.8 Caenorhabditis elegans
WBGene00003301 mir-73 T24D8.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
graphene oxide WBMol:00005439