WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Statistical analysis was based on t-test for independent samples via SPSS to compare each of the nicotine treatments with control (i.e. low vs. control and high vs. control). Welch test correction was performed to account for unequal variance in each of the compared groups (control and treatment). In addition, to increase the statistical stringency, miRNAs differential expression was deemed significant only if it fulfilled two criteria: p value , 0.05 and expression changed by at least 50% relative to control. Description  miRNAs in F2 generation down regulated by exposure to 20uM and 20mM nicotine during F0 generation.
Primary Identifier  WBPaper00049006:nicotine_downregulated_F2

0 Anatomy Terms

7 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003338 mir-244 T04D1.5 Caenorhabditis elegans
WBGene00003325 mir-232 F13H10.7 Caenorhabditis elegans
WBGene00003281 mir-53 F36H1.8 Caenorhabditis elegans
WBGene00003349 mir-255 F08F3.11 Caenorhabditis elegans
WBGene00194831 mir-2220 Y59E1B.4 Caenorhabditis elegans
WBGene00003334 mir-240 C39D10.10 Caenorhabditis elegans
WBGene00003332 mir-239.1 C34E11.5 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
nicotine WBMol:00001980