WormMine: ExpressionCluster WBPaper00042480:20mM_nicotine_downregulated

• Algorithm: Statistical analysis was based on t-test for independent samples via SPSS. The results were further narrowed based on two criteria. Only the genes whose expression changed with a P < 0.05 and a fold change > 0.5, when compared to control, were considered as differentially expressed. Fold change was calculated as 2**(DeltaCt(treatment)-DeltaCt(control))-1. DeltaCt = Ct(miRNA)-Ct(aveMRNA).
• Description: miRNA that showed decreased expression after 20mM nicotine treatment
• Primary Identifier: WBPaper00042480:20mM_nicotine_downregulated

0 Anatomy Terms

9 Genes

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00002993	lin-4	F59G1.6	Caenorhabditis elegans
WBGene00003328	mir-235	T09B4.12	Caenorhabditis elegans
WBGene00003286	mir-58.1	Y67D8A.4	Caenorhabditis elegans
WBGene00077722	mir-58.2	Y73B6A.7	Caenorhabditis elegans
WBGene00077726	mir-1820	C46A5.10	Caenorhabditis elegans
WBGene00077727	mir-1821	F59D6.9	Caenorhabditis elegans
WBGene00023455	mir-358	F25G6.11	Caenorhabditis elegans
WBGene00003353	mir-259	F25D1.6	Caenorhabditis elegans
WBGene00003283	mir-55	F09A5.6	Caenorhabditis elegans

2 Life Stages

Remark	Definition	Other Name	Public Name	Primary Identifier
	The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch.		L3 larva Ce	WBls:0000035
	The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch.		L4 larva Ce	WBls:0000038

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name	Primary Identifier
nicotine	WBMol:00001980