WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 87 expressed in: AVK.
Primary Identifier  WBPaper00065623:87

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of one pharyngeal motorneuron. M4 neuron lineage name: MSpaaaaaa WBbt:0004467
second layer pharyngeal muscle cell. pm2 m2 WBbt:0003742
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons with cell bodies situated in the ventral ganglion behind the excretory duct. AVK   WBbt:0006823

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001444 flp-1 F23B2.5 Caenorhabditis elegans
WBGene00003748 nlp-10 F37A8.4 Caenorhabditis elegans
WBGene00006979 zig-2 F42F12.2 Caenorhabditis elegans
WBGene00011392 sbt-1 T03D8.3 Caenorhabditis elegans
WBGene00017292 F09E5.16 F09E5.16 Caenorhabditis elegans
WBGene00019160 nlp-49 H05L03.3 Caenorhabditis elegans
WBGene00022472 Y119C1B.6 Y119C1B.6 Caenorhabditis elegans
WBGene00019324 K02F2.5 K02F2.5 Caenorhabditis elegans
WBGene00017748 spp-24 F23F1.7 Caenorhabditis elegans
WBGene00022202 Y72A10A.1 Y72A10A.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule