WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Seqsolve uses Cufflinks/Cuffdiff to quantify and identify transcripts with a significant level of expression between different conditions. p-value < 0,005. Description  Genes that showed significantly increased expression in nlg-1(ok259) mutants comparing to in N2.
Primary Identifier  WBPaper00053023:nlg-1(ok259)_upregulated
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0 Anatomy Terms

6 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00001067 dpy-5 F27C1.8 Caenorhabditis elegans
WBGene00001074 dpy-13 F30B5.1 Caenorhabditis elegans
WBGene00003086 lst-4 Y37A1B.2 Caenorhabditis elegans
WBGene00004862 sma-9 T05A10.1 Caenorhabditis elegans
WBGene00021491 comt-4 Y40B10A.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans

0 Regulated By Molecule