WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The primary data was analyzed with Affymetrix Expression Console. Further differential gene expression was performed using Genespring GX 11.1 with Affymetrix default analysis settings and RMA was used for normalization. The probes of intensities less than 20 percentile in the raw data were excluded prior to differential gene expression analysis. More than two fold expression changes with p value <0.05 (student's t test) are reported. Description  Genes upregulated on Rifampicin treatment determined by Microarray analysis.
Primary Identifier  WBPaper00046496:Rifampicin_upregulated

0 Anatomy Terms

54 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000150 apm-1 F55A12.7 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000372 cyp-13A7 T10B9.10 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000977 dhs-14 R05D8.8 Caenorhabditis elegans
WBGene00003375 mlp-1 T04C9.4 Caenorhabditis elegans
WBGene00004003 pgp-9 C47A10.1 Caenorhabditis elegans
WBGene00004184 ptp-4A2 T19D2.2 Caenorhabditis elegans
WBGene00004825 skr-19 R12H7.3 Caenorhabditis elegans
WBGene00004933 sod-4 F55H2.1 Caenorhabditis elegans
WBGene00006708 ubc-13 Y54G2A.31 Caenorhabditis elegans
WBGene00006875 vab-9 T22C8.8 Caenorhabditis elegans
WBGene00007141 pitr-4 B0331.2 Caenorhabditis elegans
WBGene00007422 ugt-17 C08B6.1 Caenorhabditis elegans
WBGene00007885 ugt-21 C33A12.6 Caenorhabditis elegans
WBGene00008375 D1054.8 D1054.8 Caenorhabditis elegans
WBGene00008985 F20G2.1 F20G2.1 Caenorhabditis elegans
WBGene00009811 F47B8.10 F47B8.10 Caenorhabditis elegans
WBGene00010320 F59B10.4 F59B10.4 Caenorhabditis elegans
WBGene00010341 glo-3 F59F5.2 Caenorhabditis elegans
WBGene00010904 ugt-62 M88.1 Caenorhabditis elegans
WBGene00011798 T16G1.4 T16G1.4 Caenorhabditis elegans
WBGene00011800 T16G1.6 T16G1.6 Caenorhabditis elegans
WBGene00011801 T16G1.7 T16G1.7 Caenorhabditis elegans
WBGene00012005 jun-1 T24H10.7 Caenorhabditis elegans
WBGene00012759 sup-1 Y41C4A.13 Caenorhabditis elegans
WBGene00014152 ZK930.2 ZK930.2 Caenorhabditis elegans
WBGene00015043 cyp-34A8 B0213.14 Caenorhabditis elegans
WBGene00015044 cyp-34A9 B0213.15 Caenorhabditis elegans
WBGene00015271 C01B4.7 C01B4.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 9-10 days after L4-adult molt. 12-13 days after first cleavage. 9-days post-L4 adult hermaphrodite Ce WBls:0000673

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
rifampin WBMol:00001874