WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify the genes that show consistent and significant expression changes across the independent biological replicates of hcf-1(-) or sir-2.1(O/E), authors used Significance Analysis of Microarrays (SAM) with a stringent criteria of expected false discovery rate (FDR) set at 0%. Description  Genes downregulated in hcf-1(-), no change in sir-2.1(O/E) and no change in daf-2(-).
Primary Identifier  WBPaper00040184:hcf-1down_sir-2.1nc_daf-2nc
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0 Anatomy Terms

43 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000072 add-1 F39C12.2 Caenorhabditis elegans
WBGene00000198 art-1 C15F1.6 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
WBGene00001758 gst-10 Y45G12C.2 Caenorhabditis elegans
WBGene00002041 hum-8 Y66H1A.6 Caenorhabditis elegans
WBGene00003539 nas-20 T11F9.3 Caenorhabditis elegans
WBGene00005572 sri-60 Y47G7B.3 Caenorhabditis elegans
WBGene00006667 twk-12 F29F11.4 Caenorhabditis elegans
WBGene00006874 vab-8 K12F2.2 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans
WBGene00006929 vit-5 C04F6.1 Caenorhabditis elegans
WBGene00006930 vit-6 K07H8.6 Caenorhabditis elegans
WBGene00007394 C06H5.6 C06H5.6 Caenorhabditis elegans
WBGene00007810 C29F7.1 C29F7.1 Caenorhabditis elegans
WBGene00008101 C44H9.6 C44H9.6 Caenorhabditis elegans
WBGene00009023 F21G4.1 F21G4.1 Caenorhabditis elegans
WBGene00009431 dct-17 F35E12.7 Caenorhabditis elegans
WBGene00009798 F46G10.4 F46G10.4 Caenorhabditis elegans
WBGene00010421 slc-36.4 H32K16.1 Caenorhabditis elegans
WBGene00011006 ugt-47 R04B5.9 Caenorhabditis elegans
WBGene00011407 ppat-1 T04A8.5 Caenorhabditis elegans
WBGene00016431 C35A11.4 C35A11.4 Caenorhabditis elegans
WBGene00016496 C37C3.2 C37C3.2 Caenorhabditis elegans
WBGene00016728 C46H11.2 C46H11.2 Caenorhabditis elegans
WBGene00016957 atic-1 C55F2.1 Caenorhabditis elegans
WBGene00018210 F39G3.5 F39G3.5 Caenorhabditis elegans
WBGene00018307 dyla-1 F41G4.1 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001827 hcf-1 C46A5.9 Caenorhabditis elegans

0 Regulated By Molecule