WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Seqsolve uses Cufflinks/Cuffdiff to quantify and identify transcripts with a significant level of expression between different conditions. p-value < 0,005. Description  Genes that showed significantly decreased expression in nrx-1(tm1961);nlg-1(ok259) mutants comparing to in N2.
Primary Identifier  WBPaper00053023:nrx-1(tm1961);nlg-1(ok259)_downregulated
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0 Anatomy Terms

5 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00006925 vit-1 K09F5.2 Caenorhabditis elegans
WBGene00021627 Y47D7A.15 Y47D7A.15 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

2 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans
WBGene00007799 nrx-1 C29A12.4 Caenorhabditis elegans

0 Regulated By Molecule