WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq v1.14, with cut-off p-value < 0.05 and FDR < 0.1. Description  Genes that are significantly up regulated in tdp-1(ok803) poly(A) RNA-seq verses in N2.
Primary Identifier  WBPaper00046012:tdp-1(ok803)_upregulated
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0 Anatomy Terms

925 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000060 acr-21 F27B3.2 Caenorhabditis elegans
WBGene00000120 aly-1 C01F6.5 Caenorhabditis elegans
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000177 aqp-9 K07A1.16 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000211 asm-1 B0252.2 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000288 cal-4 T07G12.1 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000523 clc-2 C01C10.1 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000655 col-79 C09G5.3 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000684 col-110 F19C7.7 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000705 col-131 C39E9.3 Caenorhabditis elegans
WBGene00000720 col-147 T06E4.4 Caenorhabditis elegans
WBGene00000722 col-149 B0024.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006514 tdp-1 F44G4.4 Caenorhabditis elegans

0 Regulated By Molecule