WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 fold change > 2, p-value < 0.01. Description  Transcripts that showed significantly decreased expression after fed by bacteria Xanthomonas citri (Orange) for 30 generations comparing to animals fed by E. coli OP50.
Primary Identifier  WBPaper00061007:X.citri_downregulated Regulated By Treatment  Bacteria diet: Xanthomonas citri Orange. Fed for 30 generations.

0 Anatomy Terms

74 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000597 col-8 F11H8.3 Caenorhabditis elegans
WBGene00000708 col-135 M199.5 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00003474 mtl-2 T08G5.10 Caenorhabditis elegans
WBGene00003522 nas-3 K06A4.1 Caenorhabditis elegans
WBGene00003704 nhr-114 Y45G5AM.1 Caenorhabditis elegans
WBGene00004130 ketn-1 F54E2.3 Caenorhabditis elegans
WBGene00004728 sax-2 F21H11.2 Caenorhabditis elegans
WBGene00004814 skr-8 C52D10.9 Caenorhabditis elegans
WBGene00004815 skr-9 C52D10.7 Caenorhabditis elegans
WBGene00004819 skr-13 C52D10.8 Caenorhabditis elegans
WBGene00005552 sri-40 Y27F2A.3 Caenorhabditis elegans
WBGene00006925 vit-1 K09F5.2 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006929 vit-5 C04F6.1 Caenorhabditis elegans
WBGene00007362 cyp-35C1 C06B3.3 Caenorhabditis elegans
WBGene00007947 C35A5.3 C35A5.3 Caenorhabditis elegans
WBGene00008566 acox-1.3 F08A8.3 Caenorhabditis elegans
WBGene00009212 atz-1 F28D1.2 Caenorhabditis elegans
WBGene00009658 pap-3 F43G6.5 Caenorhabditis elegans
WBGene00010759 cysl-2 K10H10.2 Caenorhabditis elegans
WBGene00010808 sepa-1 M01E5.6 Caenorhabditis elegans
WBGene00011668 clec-47 T09F5.9 Caenorhabditis elegans
WBGene00012198 citk-1 W02B8.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule