WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed genes were estimated using a General Linear Model approach, negative binomial distribution, and a quasi-likelihood F-test. Genes with a P-value < 0.05 and fold change > 1 were considered significant. Description  Transcripts that showed significantly increased expression in H3.3 null mutant animals (FAS43 [his-69&his-70(uge44) III; his-72(tm2066) III; his-74(uge18) V; his-71(ok2289) X]) comparing to in N2 animals at embryo stage.
Primary Identifier  WBPaper00054191:H3.3(null)_embryo_upregulated
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0 Anatomy Terms

70 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00001390 far-6 W02A2.2 Caenorhabditis elegans
WBGene00001786 gst-38 F35E8.8 Caenorhabditis elegans
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
WBGene00003092 lys-3 Y22F5A.6 Caenorhabditis elegans
WBGene00003762 nlp-24 F35B12.7 Caenorhabditis elegans
WBGene00003767 nlp-29 B0213.4 Caenorhabditis elegans
WBGene00003771 nlp-33 T19C4.7 Caenorhabditis elegans
WBGene00004222 ptr-8 F44F4.4 Caenorhabditis elegans
WBGene00006539 tbb-6 T04H1.9 Caenorhabditis elegans
WBGene00007071 AC3.5 AC3.5 Caenorhabditis elegans
WBGene00008967 F20B10.3 F20B10.3 Caenorhabditis elegans
WBGene00009090 fipr-3 F23D12.6 Caenorhabditis elegans
WBGene00009432 cld-9 F35E12.8 Caenorhabditis elegans
WBGene00010225 ttr-31 F58A3.5 Caenorhabditis elegans
WBGene00010440 ttr-51 JC8.8 Caenorhabditis elegans
WBGene00010658 K08D8.4 K08D8.4 Caenorhabditis elegans
WBGene00011561 ttr-15 T07C4.5 Caenorhabditis elegans
WBGene00012961 Y47H10A.5 Y47H10A.5 Caenorhabditis elegans
WBGene00013079 ttr-26 Y51A2D.11 Caenorhabditis elegans
WBGene00013489 col-42 Y69H2.14 Caenorhabditis elegans
WBGene00013563 Y75B8A.33 Y75B8A.33 Caenorhabditis elegans
WBGene00014009 lips-6 ZK617.2 Caenorhabditis elegans
WBGene00014148 ZK909.3 ZK909.3 Caenorhabditis elegans
WBGene00014173 srlf-34 ZK970.7 Caenorhabditis elegans
WBGene00015332 tyr-1 C02C2.1 Caenorhabditis elegans
WBGene00016436 C35B1.7 C35B1.7 Caenorhabditis elegans
WBGene00016505 ttr-33 C37C3.13 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003

0 Processes

5 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001943 his-69 E03A3.3 Caenorhabditis elegans
WBGene00001944 his-70 E03A3.4 Caenorhabditis elegans
WBGene00001945 his-71 F45E1.6 Caenorhabditis elegans
WBGene00001946 his-72 Y49E10.6 Caenorhabditis elegans
WBGene00012276 his-74 W05B10.1 Caenorhabditis elegans

0 Regulated By Molecule