WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Mapped reads were analyzed for transcript assembly and differential expression using Cufflinks 2.1.1 with a filter of twofold difference and FDR correction (P < 0.05). Description  Transcripts that showed significantly decreased expression in rbr-2(tm3141) comparing to in N2 animals.
Primary Identifier  WBPaper00050080:rbr-2(tm3141)_downregulated
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0 Anatomy Terms

656 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000024 abu-1 AC3.3 Caenorhabditis elegans
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000138 amx-2 B0019.1 Caenorhabditis elegans
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans
WBGene00000296 cat-2 B0432.5 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000499 chk-2 Y60A3A.12 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans
WBGene00000592 coh-3 F08H9.1 Caenorhabditis elegans
WBGene00000594 col-3 T28C6.6 Caenorhabditis elegans
WBGene00000599 col-10 B0222.8 Caenorhabditis elegans
WBGene00000602 col-13 F15H10.2 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000691 col-117 T28C6.4 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000717 col-144 B0222.6 Caenorhabditis elegans
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004319 rbr-2 ZK593.4 Caenorhabditis elegans

0 Regulated By Molecule