WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Kalisto abundance files were converted and analysed using Sleuth in a R pipeline. Standard Sleuth protocols were used to calculate differential expression. P value < 0.01 and FDR < 0.01. Description  Transcripts that showed significantly altered expression after L4 N2 animals were exposed to omycete Haptoglossa zoospora for 6 hours.
Primary Identifier  WBPaper00062354:H.zoospora_6h_regulated Regulated By Treatment  Fungi infection: Haptoglossa zoospora.

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000005 aat-4 T13A10.10 Caenorhabditis elegans
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000010 aat-9 Y53H1C.1 Caenorhabditis elegans
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000067 act-5 T25C8.2 Caenorhabditis elegans
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
WBGene00000103 akt-2 F28H6.1 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000144 apc-10 F15H10.3 Caenorhabditis elegans
WBGene00000151 apn-1 T05H10.2 Caenorhabditis elegans
WBGene00000158 apg-1 Y105E8A.9 Caenorhabditis elegans
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000179 aqp-11 ZK525.2 Caenorhabditis elegans
WBGene00000207 asb-2 F02E8.1 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000216 asp-3 H22K11.1 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000219 asp-6 F21F8.7 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000246 bcc-1 M7.3 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000285 cal-1 C13C12.1 Caenorhabditis elegans
WBGene00000286 cal-2 C18E9.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule