WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify the differentially expressed genes, we applied Significance Analysis of Microarrays (SAM) analysis using the R package samr [46]. Genes with median false discovery <5% and fold changes >2.0 were considered differentially expressed. Description  Genes that showed significantly decreased experssion after 22.5 hours of treatment in 200nM delta7-dafachronic acid comparing with in ethanol vehicle control.
Primary Identifier  WBPaper00046548:dafachronic-acid_downregulated

0 Anatomy Terms

912 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000024 abu-1 AC3.3 Caenorhabditis elegans
WBGene00000025 abu-2 F19G12.7 Caenorhabditis elegans
WBGene00000028 abu-5 Y105C5A.4 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000383 cdc-14 C17G10.4 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000430 ceh-5 C16C2.1 Caenorhabditis elegans
WBGene00000450 ceh-28 K03A11.3 Caenorhabditis elegans
WBGene00000487 che-6 C23H5.7 Caenorhabditis elegans
WBGene00000499 chk-2 Y60A3A.12 Caenorhabditis elegans
WBGene00000516 cki-1 T05A6.1 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000593 col-2 W01B6.7 Caenorhabditis elegans
WBGene00000596 col-7 C15A11.5 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
dafa#1 WBMol:00005111