| Algorithm | Two different statistical methods were used for differential gene expression analysis, DESeq and voom. For DEseq analysis, DESeq2 was applied to normalize count matrix and to perform differential gene expression on the counts using negative binomial distribution; for voom analysis, edgeR was applied to normalize count matrix, and voom was applied for gene differentiation analysis. Significant genes from both analyses were combined. To identify transcripts enriched in AMsh glia compared to other cells (control AMsh versus control non-AMsh), authors used a fold change of 3.5 and an adjusted p value threshold of <0.05. | Description | Genes enriched in AMsh glia. |
| Primary Identifier | WBPaper00049489:AMsh-glia_enriched |
| Definition | Name | Synonym | Primary Identifier |
|---|---|---|---|
| sheath cell of amphid sensillum. | amphid sheath cell | WBbt:0006754 |
| Remark | Definition | Other Name | Public Name | Primary Identifier |
|---|---|---|---|---|
| The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. | L4 larva Ce | WBls:0000038 | ||
| The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. | L3 larva Ce | WBls:0000035 |
