WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABplaaaaaa, ABarpapaaa, ABplpaaapa, ABprpaaapa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:URA_parent
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABplpaaapa   WBbt:0006093
embryonic cell ABprpaaapa   WBbt:0006149
embryonic cell ABarpapaaa   WBbt:0006207
embryonic cell ABplaaaaaa   WBbt:0006330

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000093 agt-1 Y62E10A.5 Caenorhabditis elegans
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000146 ape-1 F46F3.4 Caenorhabditis elegans
WBGene00000208 trip-4 Y53F4B.15 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000387 cdc-25.2 F16B4.8 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000408 cdk-7 Y39G10AL.3 Caenorhabditis elegans
WBGene00000409 cdk-8 F39H11.3 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000419 ced-5 C02F4.1 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000516 cki-1 T05A6.1 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000821 csp-3 Y47H9C.6 Caenorhabditis elegans
WBGene00000875 cyk-4 K08E3.6 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00001041 dnj-23 T24H10.3 Caenorhabditis elegans
WBGene00001061 dpl-1 T23G7.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule