WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_1

0 Anatomy Terms

551 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000749 col-176 ZC373.7 Caenorhabditis elegans
WBGene00001059 dpf-6 F44B9.1 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
WBGene00001242 elo-4 C40H1.4 Caenorhabditis elegans
WBGene00001245 elo-7 F56H11.3 Caenorhabditis elegans
WBGene00001390 far-6 W02A2.2 Caenorhabditis elegans
WBGene00001456 flp-13 F33D4.3 Caenorhabditis elegans
WBGene00001464 flp-21 C26F1.10 Caenorhabditis elegans
WBGene00001483 fog-3 C03C11.2 Caenorhabditis elegans
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans
WBGene00001591 glc-1 F11A5.10 Caenorhabditis elegans
WBGene00001639 gly-14 M01F1.1 Caenorhabditis elegans
WBGene00001852 hil-1 C30G7.1 Caenorhabditis elegans
WBGene00002017 hsp-16.11 T27E4.2 Caenorhabditis elegans
WBGene00002054 ifb-2 F10C1.7 Caenorhabditis elegans
WBGene00002067 ifp-1 C43C3.1 Caenorhabditis elegans
WBGene00002069 ikb-1 C04F12.3 Caenorhabditis elegans
WBGene00002094 ins-11 C17C3.4 Caenorhabditis elegans
WBGene00002103 ins-20 ZK84.7 Caenorhabditis elegans
WBGene00003574 ncx-9 C13D9.8 Caenorhabditis elegans
WBGene00003652 nhr-62 Y67A6A.2 Caenorhabditis elegans
WBGene00003727 nhr-137 C56E10.4 Caenorhabditis elegans
WBGene00003746 nlp-8 D2005.2 Caenorhabditis elegans
WBGene00003769 nlp-31 B0213.6 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule