WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Data were RMA normalized and probe-level data were Summarized with the NimbleScan software. Genes with weak signal intensity across all groups and those with low variability across samples were excluded from further analysis. Each H2S-treated sample was statistically compared to a matched untreated control using the Bioconductor package limma. The false discovery rate (FDR) method of Benjamini and Hochberg was used to adjust p-values for multiple testing. An adjusted p-value <= 0.05 was used to define differential expression. Description  Genes that are significantly down regulated after 24 hour exposure to H2S.
Primary Identifier  WBPaper00040285:H2S_24hr_downregulated

0 Anatomy Terms

355 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000019 abt-1 C24F3.5 Caenorhabditis elegans
WBGene00000023 abt-5 Y53C10A.9 Caenorhabditis elegans
WBGene00000029 abu-6 C03A7.7 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000138 amx-2 B0019.1 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000251 bli-1 C09G5.6 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000596 col-7 C15A11.5 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000616 col-39 C09G5.4 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000626 col-49 K09H9.3 Caenorhabditis elegans
WBGene00000636 col-60 F22D6.10 Caenorhabditis elegans
WBGene00000647 col-71 Y49F6B.10 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000653 col-77 M195.1 Caenorhabditis elegans
WBGene00000663 col-88 W05G11.3 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000666 col-91 F09G8.6 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
WBGene00000691 col-117 T28C6.4 Caenorhabditis elegans
WBGene00000694 col-120 Y11D7A.11 Caenorhabditis elegans
WBGene00000699 col-125 C29F4.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
hydrogen sulfide WBMol:00004296