WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify differentially expressed transcripts, normalized intensity values from the pan-neural data sets were compared to a reference (from all larval cells) using Significance Analysis of Microarray software (SAM). A two class unpaired analysis of the data was performed to identify neuron-enriched genes. Pan-neural enriched transcripts in the IVT and WT-Pico-derived data set were defined as 1.5X elevated vs the reference at a False Discovery Rate (FDR) = 3%. Description  WT-Pico Pan-neural Enriched Genes, with genes found multiple times in a single dataset removed (without dups).
Primary Identifier  WBPaper00031532:Larva_Pan_Neuronal_Enriched

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000048 acr-9 C40C9.2 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000057 acr-18 F28F8.1 Caenorhabditis elegans
WBGene00000058 acr-19 C31H5.3 Caenorhabditis elegans
WBGene00000062 acr-23 F59B1.9 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000069 acy-2 C10F3.3 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000093 agt-1 Y62E10A.5 Caenorhabditis elegans
WBGene00000096 ahr-1 C41G7.5 Caenorhabditis elegans
WBGene00000102 akt-1 C12D8.10 Caenorhabditis elegans
WBGene00000116 alh-10 C54D1.4 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000151 apn-1 T05H10.2 Caenorhabditis elegans
WBGene00000160 apb-1 Y71H2B.10 Caenorhabditis elegans
WBGene00000161 apa-2 T20B5.1 Caenorhabditis elegans
WBGene00000163 apb-3 R11A5.1 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000180 arc-1 ZK1320.6 Caenorhabditis elegans
WBGene00000192 arl-8 Y57G11C.13 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000242 bbs-2 F20D12.3 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023

0 Processes

0 Regulated By Gene

0 Regulated By Molecule