| Algorithm | Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. | Description | Transcripts that showed significantly increased expression at parasitic female stage (collected from S. ratti-infected rats), comparing to free living female stage. |
| Primary Identifier | WBPaper00050919:up_parasitic_vs_free-living_mRNA | Regulated By Treatment | parasitic vs free-living. |
| Remark | Definition | Other Name | Public Name | Primary Identifier |
|---|---|---|---|---|
| The Strongyloides life-cycle stage during which a female adult worm produces larval progeny parthenogenetically within the host organism. | Strongyloides parasitic female | WBls:0000681 | ||
| The Strongyloides life-cycle stage in which male and female adult worms reproduce sexually and live entirely outside a host organism. | Strongyloides free-living adult | WBls:0000682 |
