WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Data across the wild-type series was analyzed using the significance analysis of microarray data (SAM) algorithm to calculate the false discovery rate (FDR). Authors calculated expression ratios of wild-type/fer-1 mutants, and genes that exhibited a <= 0.1% FDR, >= 4-fold change in both fer-1 mutants, and differed by <= 2-fold between hc1 and hc24 were considered to be fer-1-regulated genes. Description  Genes upregulated by fer-1 mutants hc1 and hc24, with > 4 fold change in expression level.
Primary Identifier  WBPaper00035197:fer-1_upregulated

0 Anatomy Terms

111 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000444 ceh-21 T26C11.6 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001435 fkh-3 C29F7.4 Caenorhabditis elegans
WBGene00001436 fkh-4 C29F7.5 Caenorhabditis elegans
WBGene00002063 ife-5 Y57A10A.30 Caenorhabditis elegans
WBGene00002246 lag-2 Y73C8B.4 Caenorhabditis elegans
WBGene00003601 nhr-2 C32F10.6 Caenorhabditis elegans
WBGene00003983 pes-10 Y46G5A.27 Caenorhabditis elegans
WBGene00004353 rgs-10 F45B8.2 Caenorhabditis elegans
WBGene00004354 rgs-11 F45B8.1 Caenorhabditis elegans
WBGene00004750 sea-1 F19B10.9 Caenorhabditis elegans
WBGene00004813 skr-7 Y47D7A.1 Caenorhabditis elegans
WBGene00004814 skr-8 C52D10.9 Caenorhabditis elegans
WBGene00004815 skr-9 C52D10.7 Caenorhabditis elegans
WBGene00004816 skr-10 Y105C5B.13 Caenorhabditis elegans
WBGene00004818 skr-12 C52D10.6 Caenorhabditis elegans
WBGene00006547 tbx-11 F40H6.4 Caenorhabditis elegans
WBGene00006552 tbx-33 Y66A7A.8 Caenorhabditis elegans
WBGene00006556 tbx-37 Y47D3A.12 Caenorhabditis elegans
WBGene00006557 tbx-38 C24H11.3 Caenorhabditis elegans
WBGene00006902 vet-6 F44F1.7 Caenorhabditis elegans
WBGene00007303 rnh-1.3 C04F12.9 Caenorhabditis elegans
WBGene00007331 pho-11 C05C10.4 Caenorhabditis elegans
WBGene00007850 C31G12.1 C31G12.1 Caenorhabditis elegans
WBGene00007961 C35D6.4 C35D6.4 Caenorhabditis elegans
WBGene00008495 F01D5.5 F01D5.5 Caenorhabditis elegans
WBGene00009202 aptf-4 F28C6.1 Caenorhabditis elegans
WBGene00009537 ccch-2 F38C2.5 Caenorhabditis elegans
WBGene00009539 F38C2.7 F38C2.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

2 Processes

Primary Identifier
WBbiopr:00000037
WBbiopr:00000040

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001414 fer-1 F43G9.6 Caenorhabditis elegans

0 Regulated By Molecule