WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Testable genes were defined as having reliable signals in two different biological replicates using the Agilent microarray chip. Multiple probes for the same gene were removed, keeping the probe with the lowest p-value as defined by a one-tailed t-test comparing all testable probes versus probes towards a designated gene. The testable data was then supplemented with the enrichment values (as percent ranks) of a fifth replicate, from another microarray platform GPL5883 (which had a single probe for each gene), and statistical significance was re-calculate. p < 0.001 was the final cutoff. Description  Genes enriched in neuronal miRNA-induced silencing complexes (miRISC) as detected by immunoprecipitations and microarray analysis.
Primary Identifier  WBPaper00042548:miRISC_enriched

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679

698 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
WBGene00000047 acr-8 ZC504.2 Caenorhabditis elegans
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
WBGene00000058 acr-19 C31H5.3 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000069 acy-2 C10F3.3 Caenorhabditis elegans
WBGene00000070 acy-3 C44F1.5 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000085 aex-2 T14B1.2 Caenorhabditis elegans
WBGene00000105 alg-1 F48F7.1 Caenorhabditis elegans
WBGene00000135 amt-3 M195.3 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000280 cah-2 D1022.8 Caenorhabditis elegans
WBGene00000286 cal-2 C18E9.1 Caenorhabditis elegans
WBGene00000288 cal-4 T07G12.1 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000441 ceh-18 ZC64.3 Caenorhabditis elegans
WBGene00000465 cpg-1 C07G2.1 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000488 che-7 F26D11.10 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000529 clh-2 B0491.8 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015007 ain-2 B0041.2 Caenorhabditis elegans

0 Regulated By Molecule