WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in AVBL, AVBR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:AVB
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Ventral cord interneuron, synapses onto VB and DB motor neurons; formerly called beta. AVBR lineage name: ABprpaapaap WBbt:0003867
Ventral cord interneuron, synapses onto VB and DB motor neurons; formerly called beta. AVBL lineage name: ABplpaapaap WBbt:0003868

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000047 acr-8 ZC504.2 Caenorhabditis elegans
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000441 ceh-18 ZC64.3 Caenorhabditis elegans
WBGene00000446 ceh-23 ZK652.5 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00001137 eat-6 B0365.3 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001204 egl-38 C04G2.7 Caenorhabditis elegans
WBGene00001400 fax-1 F56E3.4 Caenorhabditis elegans
WBGene00001433 fkb-8 Y18D10A.25 Caenorhabditis elegans
WBGene00001452 flp-9 C36H8.3 Caenorhabditis elegans
WBGene00001457 flp-14 Y37D8A.15 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans
WBGene00001502 ftt-2 F52D10.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule