WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in AVJL, AVJR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:AVJ
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron, synapses like AVHL/R AVJR lineage name: ABalapppppa WBbt:0003846
Neuron, synapses like AVHL/R AVJL lineage name: ABalapapppa WBbt:0003847

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000005 aat-4 T13A10.10 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000071 acy-4 T01C2.1 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000187 arl-1 F54C9.10 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000286 cal-2 C18E9.1 Caenorhabditis elegans
WBGene00000289 cam-1 C01G6.8 Caenorhabditis elegans
WBGene00000392 cdd-2 F49E8.4 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000436 ceh-12 F33D11.4 Caenorhabditis elegans
WBGene00000476 cfi-1 T23D8.8 Caenorhabditis elegans
WBGene00000540 cln-3.2 C01G8.2 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000703 col-129 M18.1 Caenorhabditis elegans
WBGene00000763 coq-3 Y57G11C.11 Caenorhabditis elegans
WBGene00000975 dhs-12 K08F4.9 Caenorhabditis elegans
WBGene00001136 eat-5 F13G3.8 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
WBGene00001612 glr-1 C06E1.4 Caenorhabditis elegans
WBGene00001613 glr-2 B0280.12 Caenorhabditis elegans
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
WBGene00001664 gpa-2 F38E1.5 Caenorhabditis elegans
WBGene00001669 gpa-7 R10H10.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule