WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in AVG according to single cell RNAseq.
Primary Identifier  WBPaper00061340:AVG
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one ventral cord interneuron, few synapses. AVG lineage name: ABprpapppap WBbt:0003850

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
WBGene00000044 acr-5 K03F8.2 Caenorhabditis elegans
WBGene00000048 acr-9 C40C9.2 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000059 acr-20 R06A4.10 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000279 cah-1 F54D8.4 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000439 ceh-16 C13G5.1 Caenorhabditis elegans
WBGene00000552 cmd-1 T21H3.3 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00000951 deg-3 K03B8.9 Caenorhabditis elegans
WBGene00000980 dhs-17 F29G9.6 Caenorhabditis elegans
WBGene00001052 dop-1 F15A8.5 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001208 egl-44 F28B12.2 Caenorhabditis elegans
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001450 flp-7 F49E10.3 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001515 gap-1 T24C12.2 Caenorhabditis elegans
WBGene00001537 gcy-11 C30G4.3 Caenorhabditis elegans
WBGene00001588 lgc-56 F09C12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule