WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in anal sphincter muscle according to single cell RNAseq.
Primary Identifier  WBPaper00061340:mu_sph
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
a saddle-shaped muscle cell that encircles the intestinal-rectal valve anal sphincter muscle lineage name: ABprpppppap WBbt:0005798

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00000085 aex-2 T14B1.2 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000268 bre-3 B0464.4 Caenorhabditis elegans
WBGene00000428 ceh-1 F16H11.4 Caenorhabditis elegans
WBGene00000443 ceh-20 F31E3.1 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000518 ckk-1 C05H8.1 Caenorhabditis elegans
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000768 cor-1 R01H10.3 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000857 cwn-1 K10B4.6 Caenorhabditis elegans
WBGene00001096 dsc-1 C18B12.3 Caenorhabditis elegans
WBGene00001102 dsh-2 C27A2.6 Caenorhabditis elegans
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
WBGene00001373 exp-1 H35N03.1 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001503 fum-1 H14A12.2 Caenorhabditis elegans
WBGene00001527 gcs-1 F37B12.2 Caenorhabditis elegans
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
WBGene00001816 haf-6 Y48G8AL.11 Caenorhabditis elegans
WBGene00001852 hil-1 C30G7.1 Caenorhabditis elegans
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule