WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis of two conditions was performed using DESeq R package (1.18.0). Resulting p-values were adjusted using Benjamini and Hochberg's approach. WormBase curator applied additional cut off of fold change > 2. Description  Transcripts that showed significantly increased expression in alh-6(lax105) comparing to in N2 at L4 larva stage.
Primary Identifier  WBPaper00059231:alh-6(lax105)_L4_upregulated

0 Anatomy Terms

376 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000251 bli-1 C09G5.6 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000626 col-49 K09H9.3 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000639 col-63 ZK265.2 Caenorhabditis elegans
WBGene00000645 col-69 K01A2.7 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000684 col-110 F19C7.7 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000705 col-131 C39E9.3 Caenorhabditis elegans
WBGene00000711 col-138 C52D10.13 Caenorhabditis elegans
WBGene00000745 col-172 F38B6.5 Caenorhabditis elegans
WBGene00000746 col-173 F41C6.5 Caenorhabditis elegans
WBGene00000748 col-175 C35B8.1 Caenorhabditis elegans
WBGene00000749 col-176 ZC373.7 Caenorhabditis elegans
WBGene00000902 daf-6 F31F6.5 Caenorhabditis elegans
WBGene00000930 dao-4 ZC373.6 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001067 dpy-5 F27C1.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans

0 Regulated By Molecule