WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 Description  Transcripts that showed significantly decreased expression after N2 L4 animals were infected by P. aeruginosa (PA14) bacteria for 4 hours at 25C, but pmk-1(km25) animals showed reduced fold change after they went through the same infection.
Primary Identifier  WBPaper00056275:P.aeruginosa_downregulated_pmk-1(km25)_dependent Regulated By Treatment  Bacteria infection: Pseudomonas aeruginosa PA14. 4 hours at 25C.

0 Anatomy Terms

330 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000030 abu-7 C03A7.8 Caenorhabditis elegans
WBGene00000031 abu-8 C03A7.14 Caenorhabditis elegans
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
WBGene00000181 ard-1 F01G4.2 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
WBGene00000281 cah-3 K05G3.3 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000703 col-129 M18.1 Caenorhabditis elegans
WBGene00000727 col-154 F55C10.2 Caenorhabditis elegans
WBGene00000743 col-170 T10E10.6 Caenorhabditis elegans
WBGene00000768 cor-1 R01H10.3 Caenorhabditis elegans
WBGene00000778 cpn-2 D1069.2 Caenorhabditis elegans
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00000785 cpr-5 W07B8.5 Caenorhabditis elegans
WBGene00000788 cpz-1 F32B5.8 Caenorhabditis elegans
WBGene00000832 ctn-1 Y23H5A.5 Caenorhabditis elegans
WBGene00000875 cyk-4 K08E3.6 Caenorhabditis elegans
WBGene00000929 dao-3 K07E3.3 Caenorhabditis elegans
WBGene00000987 dhs-24 Y60A3A.10 Caenorhabditis elegans
WBGene00001037 dnj-19 T05C3.5 Caenorhabditis elegans
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans

0 Regulated By Molecule