WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The Cuffdiff Differential Gene Expression tool (version 0.0.5) was used to calculate differential gene expression using a false discovery rate of 0.05, a minimum alignment count of 100 and with bias correction to obtain gene and transcript expression level data along with fold change (in log2 scale) and P values (raw and corrected for multiple testing). Description  Transcripts that showed significantly decreased expression by DAF-16 by comparing glp-1(e2141ts) with daf-16(mu86);glp-1(e2141ts) animals.
Primary Identifier  WBPaper00049217:DAF-16_downregulated

0 Anatomy Terms

195 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000276 byn-1 F57B9.5 Caenorhabditis elegans
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000671 col-96 Y41C4A.19 Caenorhabditis elegans
WBGene00000754 col-181 W03G11.1 Caenorhabditis elegans
WBGene00000785 cpr-5 W07B8.5 Caenorhabditis elegans
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001234 eif-6 C47B2.5 Caenorhabditis elegans
WBGene00001303 sec-61.G F32D8.6 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001430 fkb-5 C50F2.6 Caenorhabditis elegans
WBGene00001581 gfi-1 F57F4.3 Caenorhabditis elegans
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00002025 hsp-60 Y22D7AL.5 Caenorhabditis elegans
WBGene00002070 ile-1 K07A1.8 Caenorhabditis elegans
WBGene00002083 inf-1 F57B9.6 Caenorhabditis elegans
WBGene00002137 inx-15 R12E2.9 Caenorhabditis elegans
WBGene00002199 kin-15 M176.6 Caenorhabditis elegans
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans
WBGene00002255 lbp-3 F40F4.4 Caenorhabditis elegans
WBGene00002257 lbp-5 W02D3.7 Caenorhabditis elegans
WBGene00002259 lbp-7 T22G5.2 Caenorhabditis elegans
WBGene00002272 lec-9 C16H3.2 Caenorhabditis elegans
WBGene00003169 mec-5 E03G2.3 Caenorhabditis elegans
WBGene00003249 mig-18 F11F1.6 Caenorhabditis elegans
WBGene00003402 mpk-2 C04G6.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans

0 Regulated By Molecule