WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 151 expressed in: Cephalic and inner labial socket.
Primary Identifier  WBPaper00065623:151
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
An interfacial epithelial cell which forms a distal cap on a sheath cell to bind the sheath of a sensillum to the neighboring hypodermis, via adherens junctions. There is often a narrow opening through the socket from the exterior into the sheath channel, allowing ciliated dendrites to be exposed to the external environment. The socket cell functions similarly to a glial cell. socket cell   WBbt:0005750
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of two neurons, which have ciliated endings situated immediately dorsal to the lateral inner labial sensilla in the head but have no associated sheath or socket cells; they have flattened processes in this region of the cilium. FLP   WBbt:0006828
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. LUA   WBbt:0008031

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000687 col-113 C34D4.15 Caenorhabditis elegans
WBGene00000747 col-174 F46C8.2 Caenorhabditis elegans
WBGene00004231 ptr-17 Y18D10A.7 Caenorhabditis elegans
WBGene00045024 C43F9.11 C43F9.11 Caenorhabditis elegans
WBGene00020478 T13C2.2 T13C2.2 Caenorhabditis elegans
WBGene00015514 srlf-1 C06A8.3 Caenorhabditis elegans
WBGene00001721 grl-12 F28A12.2 Caenorhabditis elegans
WBGene00010345 F59F5.7 F59F5.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule