WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  N.A. Description  Transcripts upregulated consistently in let-7(n2853), lin-41(xe11) and lin-41(xe11); let-7(n2853) mutant worms, compared to wild-type worms (on RPF, ribosome-protected fragments, level)
Primary Identifier  WBPaper00050717:let-7(n2853)_lin-41(xe11)_upregulated
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0 Anatomy Terms

32 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000729 col-156 F57B7.3 Caenorhabditis elegans
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
WBGene00001063 dpy-1 M01E10.2 Caenorhabditis elegans
WBGene00002051 ifa-3 F52E10.5 Caenorhabditis elegans
WBGene00002087 ins-4 ZK75.1 Caenorhabditis elegans
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
WBGene00004000 pgp-6 T21E8.1 Caenorhabditis elegans
WBGene00004227 ptr-13 K07C10.1 Caenorhabditis elegans
WBGene00011833 T19B10.5 T19B10.5 Caenorhabditis elegans
WBGene00013007 Y48E1B.8 Y48E1B.8 Caenorhabditis elegans
WBGene00017069 timm-17B.2 D2096.1 Caenorhabditis elegans
WBGene00018295 oac-29 F41E6.14 Caenorhabditis elegans
WBGene00018694 F52E1.5 F52E1.5 Caenorhabditis elegans
WBGene00018786 hmbx-1 F54A5.1 Caenorhabditis elegans
WBGene00019960 ztf-16 R08E3.4 Caenorhabditis elegans
WBGene00016805 C50D2.1 C50D2.1 Caenorhabditis elegans
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans
WBGene00020618 T20D4.12 T20D4.12 Caenorhabditis elegans
WBGene00020616 T20D4.10 T20D4.10 Caenorhabditis elegans
WBGene00011537 idpc-7 T06E4.10 Caenorhabditis elegans
WBGene00001712 grl-3 K03B8.7 Caenorhabditis elegans
WBGene00010468 K01D12.9 K01D12.9 Caenorhabditis elegans

4 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

2 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002285 let-7 C05G5.6 Caenorhabditis elegans
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans

0 Regulated By Molecule