WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Survival during heat stress was analyzed using a non-parametric (Mantel-Haenszel) Log rank test and presented as Kaplan-Meier survival curves (Prism software package). For the TSA analysis all full genome wide expression analyses involved comparisons of two groups and thus on a gene by gene basis, for each set, authors performed two-sample t-tests on the log2 transformed expression measures to derive raw p-values. The Benjamini and Hochberg was then used to report the inference adjusted for multiple comparisons (q-values), in their case controlling false discovery rate (FDR). Statistically significant differential expression was defined as FDR q-value <= 0.05, thereby controlling FDR at <= 0.05 for each set of comparisons. Shown here are heat shock vs control ratio and raw p_value based on two-sample t-test. Description  Genes for which heat shock F3 (fraction 3, containing heavy polysomes) versus control F3 is significantly decreased
Primary Identifier  WBPaper00037147:heatshock_downregulated Regulated By Treatment  heat shock

0 Anatomy Terms

63 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001132 alp-1 T11B7.4 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001795 gtl-1 C05C12.3 Caenorhabditis elegans
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans
WBGene00003561 ncr-1 F02E8.6 Caenorhabditis elegans
WBGene00003843 oct-2 ZK455.8 Caenorhabditis elegans
WBGene00004986 spp-1 T07C4.4 Caenorhabditis elegans
WBGene00005003 spp-18 F27C8.4 Caenorhabditis elegans
WBGene00006634 tsp-8 F33C8.3 Caenorhabditis elegans
WBGene00006710 ubc-15 Y110A2AR.2 Caenorhabditis elegans
WBGene00006760 unc-23 H14N18.1 Caenorhabditis elegans
WBGene00006764 unc-27 ZK721.2 Caenorhabditis elegans
WBGene00006886 vap-1 F11C7.3 Caenorhabditis elegans
WBGene00007362 cyp-35C1 C06B3.3 Caenorhabditis elegans
WBGene00008499 cyp-37A1 F01D5.9 Caenorhabditis elegans
WBGene00008514 mrpl-44 F02A9.4 Caenorhabditis elegans
WBGene00008621 F09C8.1 F09C8.1 Caenorhabditis elegans
WBGene00008831 F14H3.12 F14H3.12 Caenorhabditis elegans
WBGene00009192 asah-2 F27E5.1 Caenorhabditis elegans
WBGene00009237 F28H7.3 F28H7.3 Caenorhabditis elegans
WBGene00009433 F35E12.9 F35E12.9 Caenorhabditis elegans
WBGene00010296 dgat-2 F59A1.10 Caenorhabditis elegans
WBGene00011486 T05E12.3 T05E12.3 Caenorhabditis elegans
WBGene00011540 T06E6.10 T06E6.10 Caenorhabditis elegans
WBGene00011683 phat-6 T10B10.6 Caenorhabditis elegans
WBGene00012059 T26G10.1 T26G10.1 Caenorhabditis elegans
WBGene00012755 Y41C4A.8 Y41C4A.8 Caenorhabditis elegans
WBGene00013073 hmit-1.1 Y51A2D.4 Caenorhabditis elegans
WBGene00013646 Y105C5B.3 Y105C5B.3 Caenorhabditis elegans
WBGene00013884 ZC412.3 ZC412.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule