WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The random variance model (RVM)t-test was applied toidentify differentially expressed mRNAs and miRNAsbetween the SiNPs-treated group and the control group. P-value <0.05 and fold change (FC) >1.5 were considered as the threshold screening between the SiNP-treated groupand the control group. Description  Micro RNAs that showed significantly increased expression in animals after 24 hour exposure to 100ug per ml silica nanoparticles (SiNPs).
Primary Identifier  WBPaper00060100:SiNP_upregulated_miRNA
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0 Anatomy Terms

24 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002285 let-7 C05G5.6 Caenorhabditis elegans
WBGene00003335 mir-241 F56A12.4 Caenorhabditis elegans
WBGene00219226 mir-4929 E01G4.9 Caenorhabditis elegans
WBGene00003327 mir-234 C13B4.3 Caenorhabditis elegans
WBGene00195008 mir-4813 F35G12.13 Caenorhabditis elegans
WBGene00003331 mir-238 K01F9.5 Caenorhabditis elegans
WBGene00077725 mir-1832.1 C18D11.11 Caenorhabditis elegans
WBGene00003286 mir-58.1 Y67D8A.4 Caenorhabditis elegans
WBGene00194829 mir-2217.1 F36H12.64 Caenorhabditis elegans
WBGene00194805 mir-2210 ZK593.12 Caenorhabditis elegans
WBGene00003319 mir-124 C29E6.7 Caenorhabditis elegans
WBGene00045325 mir-789.1 Y51H4A.34 Caenorhabditis elegans
WBGene00045326 mir-789.2 T28F3.10 Caenorhabditis elegans
WBGene00023455 mir-358 F25G6.11 Caenorhabditis elegans
WBGene00003353 mir-259 F25D1.6 Caenorhabditis elegans
WBGene00003303 mir-75 T24D8.8 Caenorhabditis elegans
WBGene00003364 mir-271 C04F6.6 Caenorhabditis elegans
WBGene00045341 mir-784 C18A11.8 Caenorhabditis elegans
WBGene00045350 mir-788 T01B10.6 Caenorhabditis elegans
WBGene00045327 mir-793 M03B6.6 Caenorhabditis elegans
WBGene00003275 mir-47 K02B9.5 Caenorhabditis elegans
WBGene00077707 mir-1829.3 F39B1.2 Caenorhabditis elegans
WBGene00194840 mir-2212 R11.6 Caenorhabditis elegans
WBGene00003291 mir-63 C16H3.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
silicon dioxide nanoparticle WBMol:00007893