WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  After feature quantification with cuffquant v2.2.1, differential gene expression was done with Cuffdiff v2.2.1. Differentially expressed genes (q value < 0.05, false-discovery rate-adjusted P values of the test statistic) of each pairwise comparison were identified. Description  Mitochondrial transcripts that showed significntly increased expression in nfyb-1(cu13), comparing to in N2.
Primary Identifier  WBPaper00060006:nfyb-1(cu13)_upregulated_transcript

0 Anatomy Terms

22 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000207 asb-2 F02E8.1 Caenorhabditis elegans
WBGene00000829 ctb-1 MTCE.21 Caenorhabditis elegans
WBGene00001149 bcat-1 K02A4.1 Caenorhabditis elegans
WBGene00001150 ech-1.1 C29F3.1 Caenorhabditis elegans
WBGene00001156 ech-7 Y105E8A.4 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00003124 mai-1 K10B3.9 Caenorhabditis elegans
WBGene00004954 spd-3 H34C03.1 Caenorhabditis elegans
WBGene00007918 sphk-1 C34C6.5 Caenorhabditis elegans
WBGene00010957 nduo-6 MTCE.3 Caenorhabditis elegans
WBGene00010958 ndfl-4 MTCE.4 Caenorhabditis elegans
WBGene00010959 nduo-1 MTCE.11 Caenorhabditis elegans
WBGene00010960 atp-6 MTCE.12 Caenorhabditis elegans
WBGene00010962 ctc-3 MTCE.23 Caenorhabditis elegans
WBGene00010963 nduo-4 MTCE.25 Caenorhabditis elegans
WBGene00010964 ctc-1 MTCE.26 Caenorhabditis elegans
WBGene00010965 ctc-2 MTCE.31 Caenorhabditis elegans
WBGene00010966 nduo-3 MTCE.34 Caenorhabditis elegans
WBGene00010967 nduo-5 MTCE.35 Caenorhabditis elegans
WBGene00017640 F20D6.11 F20D6.11 Caenorhabditis elegans
WBGene00020402 T10B11.6 T10B11.6 Caenorhabditis elegans
WBGene00022861 dve-1 ZK1193.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021132 nfyb-1 W10D9.4 Caenorhabditis elegans

0 Regulated By Molecule